Parasitemia against amplification success

Parasitemia against amplification success

Usage

generate_parasitemia_by_amplification_success_plot(
  summary_samples_for_batch,
  threshold,
  sample_colours = default_sample_colours,
  batch_name = ""
)

generate_parasitemia_by_amplification_success_plots(
  summary_samples,
  threshold,
  sample_colours = default_sample_colours
)

Arguments

summary_samples_for_batch, summary_samples

Output of summarise_samples(), for one batch or all batches.

threshold

Reads needed to count a target as amplified, for the axis label.

sample_colours

Named colours for each sample type.

batch_name

Batch name for the title.

Value

A ggplot, or a named list of ggplots (one per batch) for the plural function.