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Combines the targets excluded in the panel settings with long targets (insert plus primers longer than long_target_threshold), which are known to perform less well.

Usage

qc_excluded_targets(
  panel_information,
  settings = default_panel_settings(),
  long_target_threshold = 275
)

Arguments

panel_information

Data frame read from panel_information/amplicon_info.tsv.

settings

Panel settings, see panel_settings().

long_target_threshold

Length in bp, including primers, above which a target is considered long.

Value

A list with excluded (all excluded target names) and long (the long target names).