Simulate observed genotypes
Usage
simulate_observed_genotype(
true_genotypes,
epsilon_pos,
epsilon_neg,
missingness
)
Arguments
- true_genotypes
a list of numeric vectors that are input
to sim_observed_allele
- epsilon_pos
expected number of false positives
- epsilon_neg
expected number of false negatives
- missingness
probability of data being missing
Value
List the same length as true_genotypes, each element a binary
vector of observed alleles as returned by simulate_observed_allele().
Details
Simulate the observation process across a list of observation
vectors
Examples
true_genotypes <- list(c(1, 0, 1), c(0, 2, 0))
simulate_observed_genotype(
true_genotypes,
epsilon_pos = 0.01, epsilon_neg = 0.1, missingness = 0
)
#> [[1]]
#> [1] 1 0 1
#>
#> [[2]]
#> [1] 0 1 0
#>
