Calculates complexity of infection for a list of samples, using the number of
detected alleles.
Arguments
- dsmp
a list with each element corresponding to one sample.
- lrank
the rank of the locus that will determine a sample's COI (loci
are ranked by the number of detected alleles).
Value
a vector with estimated COI for each sample.
Examples
coi <- getCOI(dsmp, lrank = 2)
